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1

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 ||

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 14.96 MB

english, 2017

2

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Molecular Dynamics Simulation of Supercoiled, Knotted, and Catenated DNA Molecules, Including Modeling of Action of DNA Gyrase

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 3.42 MB

english, 2017

3

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Measuring In Vivo Protein Dynamics Throughout the Cell Cycle Using Microfluidics

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 574 KB

english, 2017

4

Management of E. coli sister chromatid cohesion in response to genotoxic stress

Vickridge, Elise, Planchenault, Charlene, Cockram, Charlotte, Junceda, Isabel Garcia, Espéli, Olivier

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 1.31 MB

english, 2017

5

In vivo cleavage of Escherichia coli BIME-2 repeats by DNA gyrase: genetic characterization of the target and identification of the cut site

Olivier Espéli, Frédéric Boccard

Journal:

Molecular Microbiology

Year:

1997

Language:

english

File:

PDF, 701 KB

english, 1997

6

SetB: an integral membrane protein that affects chromosome segregation in Escherichia coli

Olivier Espeli, Pearl Nurse, Cindy Levine, Chong Lee, Kenneth J. Marians

Journal:

Molecular Microbiology

Year:

2003

Language:

english

File:

PDF, 799 KB

english, 2003

7

Untangling intracellular DNA topology

Olivier Espeli, Kenneth J. Marians

Journal:

Molecular Microbiology

Year:

2004

Language:

english

File:

PDF, 96 KB

english, 2004

8

DNA dynamics vary according to macrodomain topography in the E. coli chromosome

Olivier Espeli, Romain Mercier, Frédéric Boccard

Journal:

Molecular Microbiology

Year:

2008

Language:

english

File:

PDF, 670 KB

english, 2008

9

Transcription attenuation associated with bacterial repetitive extragenic BIME elements

Olivier Espéli, Laurent Moulin, Frédéric Boccard

Journal:

Journal of Molecular Biology

Year:

2001

Language:

english

File:

PDF, 338 KB

english, 2001

10

The MatP/matS Site-Specific System Organizes the Terminus Region of the E. coli Chromosome into a Macrodomain

Romain Mercier, Marie-Agnès Petit, Sophie Schbath, Stéphane Robin, Meriem El Karoui, Frédéric Boccard, Olivier Espéli

Journal:

Year:

2008

Language:

english

File:

PDF, 911 KB

english, 2008

11

Organization of the Escherichia coli chromosome into macrodomains and its possible functional implications

Olivier Espéli, Frédéric Boccard

Journal:

Journal of Structural Biology

Year:

2006

Language:

english

File:

PDF, 474 KB

english, 2006

12

NKBOR, a mini-Tn10-based transposon for random insertion in the chromosome of Gram-negative bacteria and the rapid recovery of sequences flanking the insertion sites in Escherichia coli

Michèle Rossignol, Alan Basset, Olivier Espéli, Frédéric Boccard

Journal:

Research in Microbiology

Year:

2001

Language:

english

File:

PDF, 83 KB

english, 2001

13

Temporal Regulation of Topoisomerase IV Activity in E. coli

Olivier Espeli, Cindy Levine, Heide Hassing, Kenneth J. Marians

Journal:

Year:

2003

Language:

english

File:

PDF, 1.18 MB

english, 2003

14

Multidisciplinary perspectives on bacterial genome organization and dynamics

Dame, Remus T., Espéli, Olivier, Grainger, David C., Wiggins, Paul A.

Journal:

Molecular Microbiology

Year:

2012

Language:

english

File:

PDF, 90 KB

english, 2012

15

Let's get ‘Fisical’ with bacterial nucleoid

Le Chat, Ludovic, Espéli, Olivier

Journal:

Molecular Microbiology

Year:

2012

Language:

english

File:

PDF, 226 KB

english, 2012

16

Molecular Basis for a Protein-Mediated DNA-Bridging Mechanism that Functions in Condensation of the E. coli Chromosome

Dupaigne, Pauline, Tonthat, Nam K., Espéli, Olivier, Whitfill, Travis, Boccard, Frédéric, Schumacher, Maria A.

Journal:

Year:

2012

Language:

english

File:

PDF, 2.67 MB

english, 2012

17

Structural Basis for Galectin-1-dependent Pre-B Cell Receptor (Pre-BCR) Activation

Elantak, Latifa, Espeli, Marion, Boned, Annie, Bornet, Olivier, Bonzi, Jeremy, Gauthier, Laurent, Feracci, Mikael, Roche, Philippe, Guerlesquin, Françoise, Schiff, Claudine

Journal:

Journal of Biological Chemistry

Year:

2012

Language:

english

File:

PDF, 3.78 MB

english, 2012

18

Sister chromatid interactions in bacteria revealed by a site-specific recombination assay

Lesterlin, Christian, Gigant, Emmanuelle, Boccard, Frédéric, Espéli, Olivier

Journal:

The EMBO Journal

Year:

2012

Language:

english

File:

PDF, 708 KB

english, 2012

19

Long-Range Chromosome Organization in E. coli: A Site-Specific System Isolates the Ter Macrodomain

Thiel, Axel, Valens, Michèle, Vallet-Gely, Isabelle, Espéli, Olivier, Boccard, Frédéric, Hughes, Diarmaid

Journal:

Year:

2012

Language:

english

File:

PDF, 1.11 MB

english, 2012

20

The Sm-like RNA chaperone Hfq mediates transcription antitermination at Rho-dependent terminators

Rabhi, Makhlouf, Espéli, Olivier, Schwartz, Annie, Cayrol, Bastien, Rahmouni, A Rachid, Arluison, Véronique, Boudvillain, Marc

Journal:

The EMBO Journal

Year:

2011

Language:

english

File:

PDF, 737 KB

english, 2011

21

Chromosome Structuring Limits Genome Plasticity in Escherichia coli

Esnault, Emilie, Valens, Michèle, Espéli, Olivier, Boccard, Frédéric

Journal:

Year:

2007

Language:

english

File:

PDF, 1.27 MB

english, 2007

22

A MatP-divisome interaction coordinates chromosome segregation with cell division in E. coli

Espéli, Olivier, Borne, Romain, Dupaigne, Pauline, Thiel, Axel, Gigant, Emmanuelle, Mercier, Romain, Boccard, Frédéric

Journal:

The EMBO Journal

Year:

2012

Language:

english

File:

PDF, 2.20 MB

english, 2012

23

From structure to function of bacterial chromosomes: Evolutionary perspectives and ideas for new experiments

Lagomarsino, Marco Cosentino, Espéli, Olivier, Junier, Ivan

Journal:

Year:

2015

Language:

english

File:

PDF, 9.67 MB

english, 2015

24

Nucleoid organization in the radioresistant bacterium D einococcus radiodurans

Passot, Fanny Marie, Nguyen, Hong Ha, Dard-Dascot, Cloelia, Thermes, Claude, Servant, Pascale, Espéli, Olivier, Sommer, Suzanne

Journal:

Molecular Microbiology

Year:

2015

Language:

english

File:

PDF, 5.40 MB

english, 2015

25

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Imaging of Bacterial Chromosome Organization by 3D Super-Resolution Microscopy

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 652 KB

english, 2017

26

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Generation and Analysis of Chromosomal Contact Maps of Bacteria

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 206 KB

english, 2017

27

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Sequential Super-Resolution Imaging of Bacterial Regulatory Proteins: The Nucleoid and the Cell Membrane in Single, Fixed E. coli Cells

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 882 KB

english, 2017

28

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Isolation and Analysis of RNA Polymerase Supramolecular Complex with Associated Proteins

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 346 KB

english, 2017

29

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || High-Resolution Chromatin Immunoprecipitation: ChIP-Sequencing

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 262 KB

english, 2017

30

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Homologous Recombineering to Generate Chromosomal Deletions in Escherichia coli

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 748 KB

english, 2017

31

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Transposon Insertion Site Sequencing for Synthetic Lethal Screening

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 148 KB

english, 2017

32

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Applications of Magnetic Tweezers to Studies of NAPs

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 559 KB

english, 2017

33

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Imaging the Cell Cycle of Pathogen E. coli During Growth in Macrophage

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 618 KB

english, 2017

34

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Isolation and Characterization of Bacterial Nucleoids in Microfluidic Devices

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 580 KB

english, 2017

35

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Procedures for Model-Guided Data Analysis of Chromosomal Loci Dynamics at Short Time Scales

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 272 KB

english, 2017

36

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || A Chromosome Co-Entrapment Assay to Study Topological Protein–DNA Interactions

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 417 KB

english, 2017

37

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Nucleoid-Associated Proteins: Genome Level Occupancy and Expression Analysis

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 1.34 MB

english, 2017

38

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Measuring In Vivo Supercoil Dynamics and Transcription Elongation Rates in Bacterial Chromosomes

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 411 KB

english, 2017

39

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Biochemical Analysis of Bacterial Condensins

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 418 KB

english, 2017

40

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || WGADseq: Whole Genome Affinity Determination of Protein-DNA Binding Sites

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 335 KB

english, 2017

41

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Tethered Particle Motion Analysis of the DNA Binding Properties of Architectural Proteins

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 536 KB

english, 2017

42

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Revealing Sister Chromatid Interactions with the loxP/Cre Recombination Assay

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 208 KB

english, 2017

43

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || Modeling Bacterial DNA: Simulation of Self-Avoiding Supercoiled Worm-Like Chains Including Structural Transitions of the Helix

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 392 KB

english, 2017

44

[Methods in Molecular Biology] The Bacterial Nucleoid Volume 1624 || A User-Friendly DNA Modeling Software for the Interpretation of Cryo-Electron Microscopy Data

Espéli, Olivier

Year:

2017

Language:

english

File:

PDF, 1015 KB

english, 2017

45

Multiscale Structuring of the E. coli Chromosome by Nucleoid-Associated and Condensin Proteins

Lioy, Virginia S., Cournac, Axel, Marbouty, Martial, Duigou, Stéphane, Mozziconacci, Julien, Espéli, Olivier, Boccard, Frédéric, Koszul, Romain

Journal:

Year:

2018

Language:

english

File:

PDF, 8.83 MB

english, 2018

46

Mapping Topoisomerase IV Binding and Activity Sites on the E. coli Genome

El Sayyed, Hafez, Le Chat, Ludovic, Lebailly, Elise, Vickridge, Elise, Pages, Carine, Cornet, Francois, Cosentino Lagomarsino, Marco, Espéli, Olivier, Viollier, Patrick H.

Journal:

Year:

2016

Language:

english

File:

PDF, 6.34 MB

english, 2016

47

Characterizing meiotic chromosomes' structure and pairing using a designer sequence optimized for Hi‐C

Muller, Héloïse, Scolari, Vittore F, Agier, Nicolas, Piazza, Aurèle, Thierry, Agnès, Mercy, Guillaume, Descorps‐Declere, Stéphane, Lazar‐Stefanita, Luciana, Espeli, Olivier, Llorente, Bertrand, Fische

Journal:

Molecular Systems Biology

Year:

2018

Language:

english

File:

PDF, 2.94 MB

english, 2018

48

The Crohn’s disease-associated Escherichia coli strain LF82 relies on SOS and stringent responses to survive, multiply and tolerate antibiotics within macrophages

Demarre, Gaëlle, Prudent, Victoria, Schenk, Hanna, Rousseau, Emilie, Bringer, Marie-Agnès, Barnich, Nicolas, Tran Van Nhieu, Guy, Rimsky, Sylvie, De Monte, Silvia, Espéli, Olivier, Helaine, Sophie

Journal:

Year:

2019

Language:

english

File:

PDF, 3.66 MB

english, 2019

49

The Crohn’s disease-associated Escherichia coli strain LF82 relies on SOS and stringent responses to survive, multiply and tolerate antibiotics within macrophages

Demarre, Gaëlle, Prudent, Victoria, Schenk, Hanna, Rousseau, Emilie, Bringer, Marie-Agnès, Barnich, Nicolas, Tran Van Nhieu, Guy, Rimsky, Sylvie, De Monte, Silvia, Espéli, Olivier, Helaine, Sophie

Journal:

Year:

2019

File:

PDF, 3.66 MB

2019

50

Engineering E. coli for magnetic control and the spatial localization of functions

aubry, mary, wang, wei-an, Guyodo, Yohan, Delacou, Eugenia, Guigner, Jean-Michel, Espeli, Olivier, Lebreton, Alice, guyot, francois, GUEROUI, ZOHER

Journal:

ACS Synthetic Biology

Year:

2020

File:

PDF, 1.11 MB

2020